{ "_id": "6ac4bc8bf511ae58c09a0a17", "Package": "aRD", "Type": "Package", "Title": "Adjusted Risk Differences via Specifically Penalized Likelihood", "Version": "0.1.0", "Date": "2025-08-18", "Authors@R": "c(\nperson(\"Thomas\", \"Wolf\", role = c(\"aut\", \"cre\"), email = \"imbei@med-imbei.uni-saarland.de\"),\nperson(\"Julius Johannes\", \"Weise\", role = \"aut\"),\nperson(\"Stefan\", \"Wagenpfeil\", role = \"aut\")\n)", "Description": "Fits a linear-binomial model using a modified Newton-type\nalgorithm for solving the maximum likelihood estimation problem\nunder linear box constraints. Similar methods are described in\nWagenpfeil, Schöpe and Bekhit (2025, ISBN:9783111341972)\n\"Estimation of adjusted relative risks in log-binomial\nregression using the BSW algorithm\". In: Mau, Mukhin, Wang and\nXu (Eds.), Biokybernetika. De Gruyter, Berlin, pp. 665–676.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "URL": "https://github.com/UdS-MF-IMBEI/aRD", "BugReports": "https://github.com/UdS-MF-IMBEI/aRD/issues", "VignetteBuilder": "knitr", "RoxygenNote": "7.3.2", "Config/testthat/edition": "3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-06 09:12:34 UTC", "User": "root" }, "Config/pak/sysreqs": "make", "Repository": "https://uds-mf-imbei.r-universe.dev", "Date/Publication": "2025-08-26 10:48:51 UTC", "RemoteUrl": "https://github.com/uds-mf-imbei/ard", "RemoteRef": "HEAD", "RemoteSha": "79b2c88de4cdf248742fb5cdece571c018b44584", "Author": "Thomas Wolf [aut, cre],\nJulius Johannes Weise [aut],\nStefan Wagenpfeil [aut]", "Maintainer": "Thomas Wolf ", "_user": "uds-mf-imbei", "_type": "src", "_file": "aRD_0.1.0.tar.gz", "_fileid": "https://r2.ropensci.org/15dc02bad61c56ee242a98d56a5bfe29e295229a2dbc1869f77caf4e8798e66d", "_filesize": 179196, "_sha256": "15dc02bad61c56ee242a98d56a5bfe29e295229a2dbc1869f77caf4e8798e66d", "_expires": "2027-01-14T09:16:57.000Z", "_created": "2026-10-06T09:12:34.000Z", "_published": "2026-10-06T09:16:59.471Z", "_jobs": [ { "job": 112195807566, "time": 131, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11400744416" }, { "job": 112195807568, "time": 140, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11401023864" }, { "job": 112195807369, "time": 222, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11400794450" }, { "job": 112195807523, "time": 200, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11401522127" }, { "job": 112194750299, "time": 165, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11401496465" }, { "job": 112195807446, "time": 92, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11401112977" }, { "job": 112195807587, "time": 111, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11401307598" }, { "job": 112195807553, "time": 70, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11401731153" }, { "job": 112195807628, "time": 104, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11401397446" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256", "_status": "success", "_upstream": "https://github.com/uds-mf-imbei/ard", "_commit": { "id": "79b2c88de4cdf248742fb5cdece571c018b44584", "author": "Thomas Wolf ", "committer": "Thomas Wolf ", "message": "Remove all .DS_Store files and update .gitignore\n", "time": 1756205331 }, "_maintainer": { "name": "Thomas Wolf", "email": "imbei@med-imbei.uni-saarland.de" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0", "role": "Depends" }, { "package": "Matrix", "role": "Imports" }, { "package": "matrixStats", "role": "Imports" }, { "package": "osqp", "role": "Imports" }, { "package": "quadprog", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "boot", "role": "Imports" }, { "package": "checkmate", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "uds-mf-imbei", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_userbio": { "uuid": 192330506, "type": "organization", "name": "Institut für Medizinische Biometrie, Epidemiologie und Medizinische Informatik (IMBEI)", "followers": 1 }, "_downloads": { "count": 411, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/aRD" }, "_devurl": "https://github.com/uds-mf-imbei/ard", "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/aRD.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf" ], "_homeurl": "https://github.com/uds-mf-imbei/ard", "_realowner": "uds-mf-imbei", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2025-08-22" } ], "_exports": [ "aRD", "bootaRD", "coef", "confint", "constr", "gradF", "hess", "obj_value", "summary", "variable_selection_aRD" ], "_help": [ { "page": "aRD", "title": "Adjusted Risk differences via specifically penalized likelihood", "topics": [ "aRD" ] }, { "page": "aRD-class", "title": "S4 Class '\"aRD\"'", "topics": [ "aRD-class" ] }, { "page": "bootaRD", "title": "Bootstrapping for Risk Differences estimated by 'aRD()'", "topics": [ "bootaRD" ] }, { "page": "coef-aRD-method", "title": "Extracting the estimated model parameters of 'aRD()'", "topics": [ "coef,aRD-method" ] }, { "page": "confint-aRD-method", "title": "Estimating confidence intervals of the estimated model parameters of 'aRD()'", "topics": [ "confint,aRD-method" ] }, { "page": "constr", "title": "Setting the linear inequality constraints for 'aRD()'", "topics": [ "constr" ] }, { "page": "gradF", "title": "Deriving the first derivatives of the log likelihood function of the linear-binomial model in 'aRD()'", "topics": [ "gradF" ] }, { "page": "hess", "title": "Deriving the second partial derivatives of the log likelihood function of the linear-binomial model in 'aRD()' (Hessian matrix)", "topics": [ "hess" ] }, { "page": "obj_value", "title": "Log-Likelihood Function Value for the linear-binomial model in 'aRD()'", "topics": [ "obj_value" ] }, { "page": "summary-aRD-method", "title": "Summarizing the estimated model parameters of 'aRD()'", "topics": [ "summary,aRD-method" ] }, { "page": "variable_selection_aRD", "title": "Variable Selection (Forward or Backward) for linear-Binomial Models", "topics": [ "variable_selection_aRD" ] } ], "_rundeps": [ "backports", "boot", "checkmate", "cli", "lattice", "Matrix", "matrixStats", "osqp", "quadprog", "Rcpp", "S7" ], "_vignettes": [ { "source": "Validation.Rmd", "filename": "Validation.html", "title": "Validation", "author": "Thomas Wolf", "engine": "knitr::rmarkdown", "headings": [], "created": "2025-08-26 10:35:41", "modified": "2025-08-26 10:35:41", "commits": 1 } ], "_score": 3, "_indexed": true, "_nocasepkg": "ard", "_universes": [ "uds-mf-imbei" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-10-06T09:14:34.000Z", "distro": "resolute", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/3b3fb29645c9488e1ba192b73e15da9bc477b3383a793cbda5efd92e54561589", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.6.1", "os": "linux", "version": "0.1.0", "date": "2026-10-06T09:14:34.000Z", "distro": "resolute", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/537a3e2bf33d0d54523a33d694e7af737d6f203fd7a5ff8f3f754398dfc2c026", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-10-06T09:15:06.000Z", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/e7d4ce21c8f2a027ccefa518558e970c368e25505a0b5e3e059a649791d88776", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.6.1", "os": "mac", "version": "0.1.0", "date": "2026-10-06T09:14:49.000Z", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/01513c3d83e8cff20c3614bdab883df8dfc3ab250e765f7eba380d9b709467d4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-10-06T09:14:24.000Z", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/03dc2541fcea018d31a67c16676bd9a6aeaa4352c98888b2766d2557dc2ded73", "status": "success", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-10-06T09:13:45.000Z", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/d48a55ce8e2c7a356e50e18afdafc1549cb584175ddb10bb3e62295684ff7d75", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-10-06T09:13:28.000Z", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/701944712d238ebdaf0a74a54a2919f24a9b5735fad94fac0c6297ba73b9eb3c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" }, { "r": "4.6.1", "os": "win", "version": "0.1.0", "date": "2026-10-06T09:13:40.000Z", "commit": "79b2c88de4cdf248742fb5cdece571c018b44584", "fileid": "https://r2.ropensci.org/073977a3c22f72a9b14b913d32a303c32c36e4483d45741a60a951609fd87dc2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/uds-mf-imbei/actions/runs/37441047256" } ] }